I realize that this is going to be slightly different from the order I had for the overall, but that's ok.
10. Star Wars:The Clone Wars - I'm talking about the series here, not the two movies that aired in little minisodes. This show has the potential to be one of my favorite cartoons of all time, but its' not quite there yet. I feel like this show hasn't reached it's full potential. But it took the 2003 TMNT cartoon a couple of full seasons to reach it's full potential as well. So I've still got hope that this show will reach greatness.
9. Teen Titans - Before I saw this show, I did not expect to be a big fan of it. But I was pleasently surprised by how much I enjoyed it. It was lighter than other action shows, but managed to not be cheesy.
8. Phineas & Ferb - This is another show that I didn't expect to enjoy. But give this show a chance, and it's surprisingly addicting. This show uses the same basic formula for every episode. And for some reason, it never seems to get old.
7. Kim Possible - This was the first ever Disney cartoon that I enjoyed. In my opinion, this show had one of the greatest vocal casts that I've ever heard. This show was great because it had action for guys. but it was also very appealing for girls as well.
6. Batman Beyond - There was a good 25 or so episodes that aired during the 2000's, so there's enough that it can count for the 2000's decade. Not only was this show a great follow up to The New Batman Adventures, but I actually enjoy these episodes more than those.
5. He-Man - It's really a shame that this show was cut off after 39 episodes. This show could've been as good as the Justice League/JLU cartoon or the 2003 TMNT cartoon. And it was rumored that Hordak and She-Ra were going to appear in the third season!
4. Justice League/JLU - The final piece of the DCAU puzzle was the best one, or at least it was in my opinion. The greatest heroes in the world provided one of my favorite cartoons of all time in this great 21st century version of the Super Friends.
3. Teenage Mutant Ninja Turtles/FF/BTTS - I am still in shock that this show didn't make rabroad's list of the 25 greatest cartoons of the decade. This was exactly what a Teenage Mutant Ninja Turtles cartoon should be. The final 39 episodes were a step down, but that didn't take a way from the greatness of the series.
2. South Park - This show's episodes during the 2000's were far superior than the episodes from the 90's. No longer was this show just 30 minutes of potty mouth humor. This show has never had the consistency that Family Guy or the Simpsons had. But when this show has good episode, it's as good of either of those shows.
1. Family Guy - Family Guy in the 2000's was very much what The Simpsons was during the 90's. You knew that when you turned on Family Guy, there was about a 99% chance that the episode was going to be a quality one. In my opinion, what The Simpsons did during the 90's made it the greatest cartoon that I've ever seen. For what Family Guy did during the 2000's, I feel that it's the second greatest cartoon that I've ever seen.