Toji's introduction was cut. We just see him evacuating, and then he's with Shinji at the battle site. His relationship with Shinji was just poorly developed in the film compared to in the series.
And if this is supposed to be something new, then why is 1.0 almost entirely just repainted footage from the TV series? What's the point exactly? I'm not judging 2.0 as I haven't seen it, but 1.0 is exactly what I said it was in my review: Malibu Stacy with a hat.
Given that the Malibu Stacy with a hat genre of anime seems to be pretty big this year, with DBKai, Brotherhood, and more Inu-Yasha (Brotherhood is different, yes, but still rather pointless, and what's the point in animating the end of the Inu-Yasha manga when the manga didn't really have much of an ending?), I'll admit I'm bitter. I think I have reason to be. I want new classics, not talented people wasting their time on purposeless rehashes.