I know, I know, the manual says something completely different. That's what I thought as well, I talked to a couple service departments and they both said that the problems they saw coming back in were from engines that didn't seat properly (too low rpm).
I'd imagine the largest seller of Desmo's in NA must know something about it, no?
I just finished mine and while I had it over 5.5K often I made sure that I worked the gears a LOT, engined braked a LOT, and didn't do anything less than 100 mile rides to ensure proper heat cycles.
If you want to follow the manual, fine, I'm not saying don't, I'm just repeating what I've been told by several different service guys. And while the engineers build the things, it is ultimately these guys that spend more time on looking at them in use.