Mario
You might have installed them upsidown. The bar should sweep back and down. They shouldn't hit the fairing stay that easy. Also there should be a decent amount of bar sticking out thru the backside of the bar clamp, try pushing the bar in toward the bike more.
If those two things don't work, try rotating the clipons in toward the tank, or you may want to drop them down the fork a little to give you clearance at the fairing.
You did remember that they mount under the top triple clamp... right?